CDS
Accession Number | TCMCG015C04312 |
gbkey | CDS |
Protein Id | XP_027083922.1 |
Location | complement(join(38437720..38438089,38438365..38438471,38438790..38438996,38439094..38439264,38439419..38439565,38439953..38440019,38440115..38440275,38440534..38440582,38440668..38440930,38441026..38441085,38441253..38441327,38441528..38441611,38441686..38441787,38441882..38442014,38443757..38443821,38443901..38444084,38444697..38444887,38445737..38445811,38445903..38446100,38446179..38446326,38447029..38447501,38447575..38447717,38447799..38447853,38448296..38448496,38448677..38448772,38449794..38449937,38450058..38450138,38450309..38450396,38450587..38450763,38450867..38450946,38451120..38451225,38451365..38451459,38451543..38451684,38451771..38451889,38452684..38452788,38453087..38453200,38453996..38454172,38454447..38454611,38455063..38455146,38455682..38455804,38456645..38456779,38456865..38456951,38458277..38458494,38458597..38458685,38458862..38459022,38460196..38460291,38460403..38460462,38460571..38460636,38460736..38460897)) |
Gene | LOC113706235 |
GeneID | 113706235 |
Organism | Coffea arabica |
Protein
Length | 2232aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA506972 |
db_source | XM_027228121.1 |
Definition | DNA polymerase epsilon catalytic subunit A-like [Coffea arabica] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGAACGGCAGCGATAACAGACGGCGAGATCGCAGAGATACAAGGATTTCCAAGAAGCAGAAGCTAATTCTCAGTGCTGAGGAGCAACTCGAGTCCAAACTCGGCTTCGATCTCTTTACCGAAGGCGATAAACGCCTTGGCTGGCTCCTCACTTTTGCCTCGTCTTCTTGGGAGGATCAAGGGACTCGTAAAGTCTACAGTTGTGTCGACCTTTATTTCGTTTGCCAGGATGGTTCGACGTTTAAGGCAAAGTACAGGTACAGGCCATATTTTTATGCGGCCACCAAGCCAAAAATGGAAATGGATGTGGAGGCATATTTGAGACGACGATACGAGGGTCAAATTGCAGAGATTGAAATTATAGAGAAAGAGGATCTCGATCTTAAAAATCACCTCTCTGGCTTATCCAAATCTTATCTGAAGATAGCTTTTGATACTGTTCAACAATTGATGAGTGTCAAGAATGACCTAATGCATATTGTAGAAAGAAACCAAGAAAAGCTTGATGCTAGCGAAGCTTATGAGTTCATCTTGACAGAAAAGAGTAAACAAAGGCCTCAAGATTTTATAGATTGTATTACTGACCTCCGGGAGTATGATGTCCCCTATCACGTACGCTTTGCAATTGACAATGATGTAAAAAGTGGGCAGTGGTATGATGTTACTGTATCCAGTTCAGGAATTGAACTCCAGAGGAGGACAGATCTCTTGCAACGTGCTGAAGTTCACGTTTGTGCTTTTGATATTGAAACAACAAAGCTGCCTTTGAAATTTCCAGATGCTGAATATGATTCAATAATGATGATCTCTTACATGGTTGATGGACAGGGTTATTTGATTATCAACAGAGAGTGTGTTGGGGAAGATATAGAGGACTTAGAGTACACCCCAAAACCAGAATTTGAGGGGTACTTTAAAGTTTCCAATGTGAAAAATGAGGAATGGCTTCTTAGAGAGTGGTTTGCACATATGAAAGAAGTGAAGCCGGGGATATATGTCACATACAATGGTGATTTTTTTGACTGGCCATTCTTGGAGAGCAGAGCAGCTCATCATGGTTTTAGAATGAATGATGAGCTTGGGTTTCAGTGTGACAAGAATCAAGGCGAATGTCGTGCTAAATTTGCCTGTCATTTGGATTGCTTTGCTTGGGTAAAACGTGATAGTTATCTTCCTCAGGGAAGCCATGGCCTGAAGGCTGTTACAAAGGCCAAACTGGGTTATGACCCTTTGGAGGTAAATCCTGAGGACATGGTTCGCTTTGCAAAGGAAAGGCCCCAGATGATGGCTTCCTATTCTGTTTCTGATGCTGTGGCAACCTATTATTTATATATGACCTATGTACATCCCTTCATTTTCTCTCTTGCAACCATTATACCCATGCCTCCAGATGAAGTATTGCGGAAAGGAAGTGGGACTTTATGTGAAATGCTTCTTATGGTCCAGGCTTACAAAGCAAATGTTATCTGTCCAAACAAACACCAATCTGATCCAGAGAAGTTTTACAATAATCAGCTCCTAGAGAGTGAGACATACATTGGTGGCCATGTCGAGTGCCTAGAAAGTGGTGTTTTTAGATCTGATCTTCCAACTAGCTTTAAACTTGATCCATCTGCTTATGAGCAACTAATTGACAACCTTGATCGTGATCTACAATATGCCATTAGTGTAGAGGGAAAGATGGATCTGGAATCAATCTCAAACTACTACGAAATAAAAGATGCCATCAGTGAAAAGCTTATAAGGTTGCGAGATGACCCTGTACATGAAGAATGTCCTCTCATATATCATCTCGATGTGGCTGCTATGTATCCAAACATTATATTGACAAACAGGCTCCAGCCACCATCAATTGTCACGGATGAAATTTGCACTGCATGTGACTTCAATCGCCCAGGAAAAAATTGTCTACGAAAACTTGAATGGGTCTGGCGAGGGGAGACCTACATGGCAAAGAGAAGTGATTATCATCATCTAAAGAGGCAGCTTGAGTCGGAGCTTGTTGAAGGTGCGGATGGGCAATCAGCAAAAACTTTTCTTGAATTGCCGAAAGCAGAGCAACAATCAAAACTGAAAGACCGTCTTAGGAAATATTGCCAAAAGGCTTATAAAAGAGTACTTGACAAACCAGTTACTGAGCTTCGAGAAGCAGGGATCTGTATGCGTGAAAATTCCTTCTATGTTGACACTGTCCGTAGTTTTCGAGATAGAAGATATGAATACAAAGGTCTTAATAAAGTCTGGAAGGGAAAGTTGTCCGAAGCCAAAGCTAGTGGAAATCCTATGAGGATCCAGGAAGCACAAGACATGGTTGTTCTATATGATTCTTTACAACTTGCTCATAAGTGTATTCTCAACTCTTTCTATGGATATGTCATGCGAAAGGGTGCCAGATGGTATTCTATGGAAATGGCTGGAGCTGTTACATATACAGGAGCAAAAATTATTCAGAATGCTCGGTTGCTGATTGAAAGAATTGGAAGACCACTTGAACTAGATACAGACGGAATCTGGTGTGCCTTGCCTGGGTCTTTTCCAGAGAACTTTACCTTTAAAACAAAAGACCCAAAGAAGAAGCTGACAATCTCATACCCATGTGTTATGCTTAATGTCGATGTGGCAAGAAACAACACTAACGATCAATACCAGACTCTGAAAGATCCTATAACTAGGACCTATACAACGCACAGTGAATGCTCAATTGAGTTTGAAGTTGATGGACCCTATAAGGCTATGATTCTTCCTGCTTCCAAGGAAGAAGGAATCTTGATAAAGAAGCGTTATGCAGTTTTTAATGATGATGGGACCCTGGCAGAGCTGAAAGGTTTTGAGATTAAACGGCGTGGAGAGCTAAAGCTCATCAAAGTTTTCCAGGCTGAACTTTTTGATAAATTTCTGCATGGGTGCACCTTAGAGGAGTGCTATTCAGCTGTTGCTTCTGTTGCAAATCGATGGCTTGATCTTCTCGATAATCAAGGAAAAGACATTGCAGACAGTGAACTGCTTGATTACATATCAGAATCAAGCACAATGAGCAAGTCCTTAGCAGACTACGGTGAACAAAAGTCTTGCGCTGTTACCACAGCAAAGCGACTAGCTGATTTTTTGGGGGATACAATGGTTAAAGACAAAGGATTGCGTTGTCAATATATTGTTGCATGCGAACCAAAGGGAACCCCTGTAAGTGAGCGTGCTGTGCCAGTTGCCATATTTGAAACTGAACCTGAGATTATGAAGTTTTATGTAAGGAAGTGGTGCAAGATTTCATCAGATGGTGGCATACGTTCCATTATTGATTGGTCCTATTACAAGCAGCGTCTGAGTTCAGCTATCCAGAAAACAATTACCATTCCGGCTGCAATGCAGAAGGTGGCCAATCCTGTCCCAAGGGTAATTCATCCCGACTGGCTCCATAAGAAGGTTCGTGAGAAGGACGACAAATATCGCCAGAGGAAATTGGTTGATATCTTTGGTTCCCTGAGTAAAAATAATGGTTTAAAAGGAAGTAGTGATGTTATCAGTAACAAACAGGGAGTTGATGAACAAAATGCTGCAGATCTGGAGGATTTTGGGAAAATTAGTAGGACTTTTCGAGTTGGACCTAGACCTGTTGTTCATTGTTTTGATGCCAATGAAGTGCAGCAATTATCTAAAACAAGCTCTGAATTGGATTGTCCCCCACAACAAAGTATTCGTGATGGAGGCACTCCAAAACTATGGACATCTCCACAAGAAGCTGCTATTTCTAAGGAAAGTATTGACAGGAATGTAGATTATAGAGGATGGCTAGAATTAAAGAAAAGAAAATGGAGGGAGACACGGGAGAAAAGGAAGCGCCAGAGGTTGGACGCTGCAAGGAAATCTAATAAACAGAATGGTATTGATGTACTTCCCGGTTTCATGTTCAAATATGGAAAAGCTAAAAGCCGAGTTGGGGTTAATTCTTATTTTGAGAATCATCAGATGGCACTCACCCGCAGCCATTGGCAGATAATCCAGCTCATACCAAGTCCACAGCATGGACATTTTTTTGCCTGGGTAGTGATAGAAGGAGTCATGCGTAAGATTCCTATTACTGTTCCTAGGGTATTTTTCCTCAACTCTAAAGATCCAGTAACAGAAGAATTTCCTGGAAGGCGTGTGAATAAAGTTCTACCACATGGGCATACTAGCTACAATTTAATCGAGGTCATAATTGAAGAAGAACAGTTCAAGGAAGAAAGCAAGAAGCTTGCAGCTCACCTTGCAGATCCTGAAGTGGAGGGAATATATGAAACAAATGTGCCTTTGGAGTTTAACGCTATCCTTCAGCTTGGCTGTGTCTGTAAAGTAGATAAGAAAGCCAAAAGGCGAAATGGTCAAGATAGCTGGAGTATGAGTGAACTGCACATGAAAACAACAACTGAGTGCTCATATCTAGAACAATCACTGTCTTTCTTCTACTTGTATCACAGTATTTCTGAGGCAAGAGCAATATACGTTGGGTATTTTCCTGCATCTAGATTAATATCAGTACTGGTGGTTAATCCCTTTCAGAACAAAGAACTATCACCTCAAATTCTTGAAAGACTATTTCGAGAAGCTTGCCAGGCATTATCTTTTCAACACCCTAACTCAGCAGAAAGAATGAGTTTCAAGGTAGAGTATGTTGGACATGTCAAGGATGCTGAGAAGAACATGCAAAGAATGATAAATGACTACAGAGATCGACATCCTGGGCCTGTAATTGCTGTGATTGAGTGCCCAAATTCTGATTTGCTGAAGTCTAATATACAAGCATTAGATGATTTTCCTTGTGTGAACATTCCTTCCAATGCTCGTGATAGTCAATATCAGGCTCTTGGGTGGCAAATTGTTGCTGCAAAAATTGGGATGCATCGATGTGCAGCATCTTCTCAGTGGTTGAAAGAGAGAATCACTCTTTCACGTTATGCTCATGTACCACTTGGAAACTTGGAAGTGGATTGGCTCCTACATACAGCAGATATCTTCTTCTCAAGAGCTTTACGTGATCAGCAACAGGTTCTTTGGATATCTGATAACGGCATCCCAGACCTTGGAGGCGTGAATGAAGAAATGTCAAGCTTCATTGATGAAGTGAATCAACCAATTCTCAACTACCCTGGCGCGTATAGGAAAGTTTCTGTGGAGCTTAAGATTCATCACCTGGCTGTTAATGCTCTTCTGAAGAGCAACCAGATAAATGAAATAGAAGGAGGTACTCTGTTTGGACTGGACCAAGACCTGAATCCTGCTACTAAATTTCCAGATGAGCAATATTGCTTTGATGAGGTGACTTCATGTGCACCTGCATTTCGTGTCCTCAAACAGTTGATTCAAAGATGTCTGGCAGATGCAGTTACATCTGGAAATGTATTTGCTGATGCAATGCTGCAACATTTATACAGATGGCTTTGCAGCCCAAAGTCTAAACTACATGACCCAGCTATCTATCGCATGCTACATAAGGTTATGCAAAAGGTTTTTGCATTACTAGTGGCTGAGTTTCGCAAACTGGGTGCAACAATTGTGTTTGCTAGTTTCTCCAAAGTCATTATTGATACAGGAAAGTTTGATCTATTAGCAGCAAAAGCTTATTGTGATAGTTTGCTCAAGACTCTGCAGACTAGAGACTTATTTGAGTGGATAGAGTTTGAGCCTTTGCAGTTCTGGCACTCCTTCCTTTTCATGGATCAGTACAATTATGGCGGAATTCAAGCTAGTTTTCAAGATGAGTCGTCTAATGACAAAGCAAGACCAAGTGATGTTAGCATACAAAAGGAATCTGAGGTGGAGATTGTGTCAAGTTGGAATATTGCTGAAAACTTGCCGAAGTTGACTCAGGACCATTTCATCTTGATTGTTTCTGAATTTATGTATATGCCATGGAAATTTGCACAAGAGCAAGCTGCTAAACGAGCATGTCTGGTGGATGGTGACTTGTGCACTCCATCAATCACAGCTGCTGCTGCTGAAACTTTTGACTTACAGATGACAGAAGATCTAAAGAACAAGATTAGATCTTACTTCACGGACAAGCTTCTAAAAATTGTTTGTGATCCCAGTCTTCTCATGAAAAGAAAGTCTCACGATCAACAGAACATCATGAATACAAATACACAACCTTTGGAGAGTTGCCATCTGGGCGATCCTGCATTAGAGTTCATTAAGTATGTTTCCACAGTTTTGGCTCTTGACCAGAGTGTTCAGCATGAGGTTCTGATCATGAGGAAGAATCTGCTTAAATTTGTCCGTGTGCGAGAATTTGCACCAGAGGCTGAATTTTACAATCAATCTCCATCTTTCACTCTACCAAATGTCATTTGCAGCTATTGCAACGAGTGCAGAGACTTAGATTTATGCCGTGACAGAGCTTTACTAGGTCAGGAATGGCGTTGTGCCGTGCCTCAATGTGGGCAACCTTATGATCGCGAGCTAATGGAGAATGCTCTTCTACAGATCGTAAGGCAGAGAGAGCGACTCTACCATCTGCAGGACTTGGTATGCCTCAAGTGCAACCAGATTAAAGCTGCACACTTAGCTGAGCATTGCTCATGTGCTGGGTCATTTAGGTGCAAGGAAGATGTCTCAGAGTTCCGTAACAAGATGCAAGTTTTTCTAAACATCGCACAGGATCAGAAATTTCAGCTACTTCAAGAGTGTACTTCCTGGATCTTGGAAGTCAGTCAGTTTTGGTGA |
Protein: MNGSDNRRRDRRDTRISKKQKLILSAEEQLESKLGFDLFTEGDKRLGWLLTFASSSWEDQGTRKVYSCVDLYFVCQDGSTFKAKYRYRPYFYAATKPKMEMDVEAYLRRRYEGQIAEIEIIEKEDLDLKNHLSGLSKSYLKIAFDTVQQLMSVKNDLMHIVERNQEKLDASEAYEFILTEKSKQRPQDFIDCITDLREYDVPYHVRFAIDNDVKSGQWYDVTVSSSGIELQRRTDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSIMMISYMVDGQGYLIINRECVGEDIEDLEYTPKPEFEGYFKVSNVKNEEWLLREWFAHMKEVKPGIYVTYNGDFFDWPFLESRAAHHGFRMNDELGFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKERPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNQLLESETYIGGHVECLESGVFRSDLPTSFKLDPSAYEQLIDNLDRDLQYAISVEGKMDLESISNYYEIKDAISEKLIRLRDDPVHEECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKNCLRKLEWVWRGETYMAKRSDYHHLKRQLESELVEGADGQSAKTFLELPKAEQQSKLKDRLRKYCQKAYKRVLDKPVTELREAGICMRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNPMRIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGAVTYTGAKIIQNARLLIERIGRPLELDTDGIWCALPGSFPENFTFKTKDPKKKLTISYPCVMLNVDVARNNTNDQYQTLKDPITRTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGCTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETEPEIMKFYVRKWCKISSDGGIRSIIDWSYYKQRLSSAIQKTITIPAAMQKVANPVPRVIHPDWLHKKVREKDDKYRQRKLVDIFGSLSKNNGLKGSSDVISNKQGVDEQNAADLEDFGKISRTFRVGPRPVVHCFDANEVQQLSKTSSELDCPPQQSIRDGGTPKLWTSPQEAAISKESIDRNVDYRGWLELKKRKWRETREKRKRQRLDAARKSNKQNGIDVLPGFMFKYGKAKSRVGVNSYFENHQMALTRSHWQIIQLIPSPQHGHFFAWVVIEGVMRKIPITVPRVFFLNSKDPVTEEFPGRRVNKVLPHGHTSYNLIEVIIEEEQFKEESKKLAAHLADPEVEGIYETNVPLEFNAILQLGCVCKVDKKAKRRNGQDSWSMSELHMKTTTECSYLEQSLSFFYLYHSISEARAIYVGYFPASRLISVLVVNPFQNKELSPQILERLFREACQALSFQHPNSAERMSFKVEYVGHVKDAEKNMQRMINDYRDRHPGPVIAVIECPNSDLLKSNIQALDDFPCVNIPSNARDSQYQALGWQIVAAKIGMHRCAASSQWLKERITLSRYAHVPLGNLEVDWLLHTADIFFSRALRDQQQVLWISDNGIPDLGGVNEEMSSFIDEVNQPILNYPGAYRKVSVELKIHHLAVNALLKSNQINEIEGGTLFGLDQDLNPATKFPDEQYCFDEVTSCAPAFRVLKQLIQRCLADAVTSGNVFADAMLQHLYRWLCSPKSKLHDPAIYRMLHKVMQKVFALLVAEFRKLGATIVFASFSKVIIDTGKFDLLAAKAYCDSLLKTLQTRDLFEWIEFEPLQFWHSFLFMDQYNYGGIQASFQDESSNDKARPSDVSIQKESEVEIVSSWNIAENLPKLTQDHFILIVSEFMYMPWKFAQEQAAKRACLVDGDLCTPSITAAAAETFDLQMTEDLKNKIRSYFTDKLLKIVCDPSLLMKRKSHDQQNIMNTNTQPLESCHLGDPALEFIKYVSTVLALDQSVQHEVLIMRKNLLKFVRVREFAPEAEFYNQSPSFTLPNVICSYCNECRDLDLCRDRALLGQEWRCAVPQCGQPYDRELMENALLQIVRQRERLYHLQDLVCLKCNQIKAAHLAEHCSCAGSFRCKEDVSEFRNKMQVFLNIAQDQKFQLLQECTSWILEVSQFW |